Mascot Search Results

Peptide View

MS/MS Fragmentation of VIYSQPSAR
Found in ENSP00000289779, gene:F11R -- Junctional adhesion molecule A precursor (JAM-A) (Junctional adhesion molecule 1) (J

Match to Query 3463: 1109.517346 from(555.765949,2+)
Title: Elution from: 777.777 to 777.777 period: 300708_bibira_b1dv_10min_ip2.raw experiment: 1 cycles: 1 precIntensity: 34461.0 FinneganScanNumber: 2244
Data file 300708_BidirA_b1DV_10min_conj.msm

Monoisotopic mass of neutral peptide Mr(calc): 1109.5146
Fixed modifications: Carbamidomethyl (C)
Variable modifications: 
Y3     : Phospho (Y)
R9     : Arginine-13C615N4 (R_10)
Ions Score: 40  Expect: 0.07  
Matches (Bold Red): 16/78 fragment ions using 24 most intense peaks

#	b	b⁺⁺	b*	b*⁺⁺	b⁰	b⁰⁺⁺	Seq.	y	y⁺⁺	y*	y*⁺⁺	y⁰	y⁰⁺⁺	#
1	100.0757	50.5415					V							9
2	213.1597	107.0835					I	1011.4535	506.2304	994.4269	497.7171	993.4429	497.2251	8
3	456.1894	228.5983					Y	898.3694	449.6883	881.3429	441.1751	880.3588	440.6831	7
4	543.2214	272.1144			525.2109	263.1091	S	655.3397	328.1735	638.3132	319.6602	637.3292	319.1682	6
5	671.2800	336.1436	654.2535	327.6304	653.2694	327.1384	Q	568.3077	284.6575	551.2812	276.1442	550.2972	275.6522	5
6	768.3328	384.6700	751.3062	376.1567	750.3222	375.6647	P	440.2491	220.6282	423.2226	212.1149	422.2386	211.6229	4
7	855.3648	428.1860	838.3383	419.6728	837.3542	419.1808	S	343.1964	172.1018	326.1698	163.5886	325.1858	163.0965	3
8	926.4019	463.7046	909.3754	455.1913	908.3913	454.6993	A	256.1643	128.5858	239.1378	120.0725			2
9							R	185.1272	93.0673	168.1007	84.5540			1

Error Distribution Error Distribution (ppm)

NCBI BLAST search of VIYSQPSAR
(Parameters: blastp, nr protein database, expect=20000, no filter, PAM30)
Other BLAST web gateways

All matches to this query

Score Mr(calc): Delta Sequence

40.1 1109.5146 0.0028 VIYSQPSAR

13.0 1109.4966 0.0207 NSRSASRSR

13.0 1109.4966 0.0207 NSRSASRSR

13.0 1109.4966 0.0207 NSRSASRSR

12.3 1109.5097 0.0076 NNSHAKKGR

12.3 1109.5097 0.0076 NNSHAKKGR

12.1 1109.5245 -0.0071 VLMNMEDIK

12.1 1109.5245 -0.0071 VLMNMEDIK

10.5 1109.5142 0.0032 VLTMPETCR

9.7 1109.5002 0.0172 MNMITAALR

Score	Mr(calc):	Delta	Sequence
40.1	1109.5146	0.0028	VIYSQPSAR
13.0	1109.4966	0.0207	NSRSASRSR
13.0	1109.4966	0.0207	NSRSASRSR
13.0	1109.4966	0.0207	NSRSASRSR
12.3	1109.5097	0.0076	NNSHAKKGR
12.3	1109.5097	0.0076	NNSHAKKGR
12.1	1109.5245	-0.0071	VLMNMEDIK
12.1	1109.5245	-0.0071	VLMNMEDIK
10.5	1109.5142	0.0032	VLTMPETCR
9.7	1109.5002	0.0172	MNMITAALR

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